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E‑Cell System: Basic Concepts and Applications
The interdisciplinary field of molecular systems biology aims to understand the behavior and mechanisms of biological processes composed of individual molecular components. As we gain more qualitative and quantitative information of complex intracellular processes, biochemical modeling and simulatio...
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| Format: | Printed Book |
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Austin, Tex. : Landes Bioscience ; New York
Springer Science+Business Media
2013
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Table of Contents:
- Introduction to whole cell modeling / Pawan K. Dhar
- Foundations of E-cell simulation environment architecture / Nathan Addy and Koichi Takahashi
- Distributed cell biology simulations with the E-cell system / Masahiro Sugimoto
- A guide to modeling reaction-diffusion of molecules with the E-cell system / Satya Nanda Vel Arjunan
- A model library of bacterial chemotaxis on E-cell system / Yuri Matsuzaki
- Electrophysiological simulation of developmental changes in action potentials of cardiomyocytes / Hitomi Itoh
- Simulation of human erythrocyte metabolism / Ayako Kinoshita
- Dynamic kinetic modeling of mitochondrial energy metabolism / Katsuyuki Yugi
- A computational model of the hepatic lobule / Yasuhiro Naito
- Decoding the signaling mechanism of toll-like receptor 4 pathways in wild type and knockouts / Kumar Selvarajoo ; Guest editor: Sankar Ghosh
- Modeling of Hsp70-mediated protein refolding / Bin Hu, Matthias P. Mayer, and Masaru Tomita.