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Algorithmic and Artificial Intelligence Methods for Protein Bioinformatics
This book presents the latest developments in protein bioinformatics, introducing for the first time cutting-edge research results alongside novel algorithmic and AI methods for the analysis of protein data. In one complete, self-contained volume, Algorithmic and Artificial Intelligence Methods for...
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| Format: | Printed Book |
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Hoboken, New Jersey
John Wiley & Sons
2014
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| Series: | Wiley series on bioinformatics.
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Table of Contents:
- Emphasizing the role of proteins in construction of the developmental genetic toolkit in plants / Anamika Basu and Anasua Sarkar
- Protein sequence motif information discovery / Bernard Chen
- Identifying calcium binding sites in proteins / Hui Liu and Hai Deng
- Review of imbalanced data learning for protein methylation prediction / Zejin Ding and Yan-Quin Zhang
- Analysis and prediction of protein posttranslational modification sites / Jianjiong Gao, Qiuming Yao, Curtis Harris Bollinger, and Dong Xu
- Protein local structure prediction / Wei Zhong, Jieyue He, Robert W. Harrison, Phang C. Tai, and Yi Pan
- Protein structural boundary prediction / Gulsah Altun
- Predictions of RNA binding sites in proteins / Zhi-Ping and Luonan Chen
- Algorithmic frameworks for protein disufide connectivity determination / Rahul Singh, William Murad, and Timothy Lee
- Protein contact order prediction: update / Yi Shi, Jianjun Zhou, David S. Wishart. and Guohui Lin
- Progess in prediction of oxidation states of cysteines via computational approaches / Aiguo Du, Hui Liu, Hai Deng, and Yi Pan
- Computational methods in cryoelectron microscopy 3D structure reconsctruction / Fa Zhang, Xiaohua Wan, and Zhiyong Liu
- Fundamentals of protein structure alignment / Mark Brandt, Allen Holder, And Yoshi Shibberu
- Discovering 3D protein structures for optimal structure alignment / Tomas Novosad, Vaclav Snasel, Ajith Abraham, and Jack Y. Yang
- Algorithmic methodologies for discovery of nonsequential protein structure similarities / Bhaskar DasGupta, Joseph Dundas, and Jie Liang
- Fractal related methods for predicting protein structure classes and functions / Zu-Guo, Vo Anh, Jian- Yi Yang, Shao-Ming Zhu
- Protein tertiary model assessment / Anjum Chida, Robert W. Harrison, and Yan-Quing Zhang
- Network algorithms for protein interactions / Suely Oliveira
- Identifying protein complexes from protein-protein interaction networks / Jianxin Wang, Min Li, and Xiaoqing Peng
- Protein functional module analysis with protein-protein interaction (PPI) networks / Lei Shi, Xiujuan Lei, and Aidong Zhang
- Efficient alignment of metabolic networks with bounded treedwidth / Qiong Cheng, Piotr Berman, Robert W. Harrison, and Alexander Zelikovsky
- Protein-protein interaction network alignment: algorithms and tools / Valeria Fionda
- Protein-related drug activity comparison using support vector machines / Wei Zhong and Jieyue He
- Finding repetitions in biological networks: challenges, trends, and applications / Simona E. Rombo
- MeTaDoR: online resource and prediction server for membrane targeting peripheral proteins / Nitin Bhardwaj, Morten Kallberg, Wonhwa Cho, and Hui Lu
- Biological Networks-based analysis of gene expression signature / Gang Chen and Jianxin Wang.