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Pattern Discovery in Bioinformatics: Theory & Algorithms

Bibliographic Details
Main Author: Laxmi Parida
Format: Printed Book
Published: Boca Raton Chapman & Hall/CRC 2008
Series:Chapman and Hall/CRC mathematical & computational biology series.
Subjects:
Table of Contents:
  • 1. Introduction
  • I. The fundamentals
  • 2. Basic algorithmics
  • 3. Basic statistics
  • 4. What are patterns?
  • II. Patterns on linear strings
  • 5. Modeling the stream of life
  • 6. String pattern specifications
  • 7. Algorithms & pattern statistics
  • 8. Motif learning
  • 9. The subtle motif
  • III. Patterns on meta-data
  • 10. Permutation patterns
  • 11. Permutation pattern probabilities
  • 12. Topological motifs
  • 13. Set-theoretic algorithmic tools
  • 14. Expression & partial order motifs.